PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY12490.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C3H
Protein Properties Length: 318aa    MW: 35642.1 Da    PI: 7.4656
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY12490.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.61.7e-0694113626
                 -SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   6 CrffartGtCkyGdrCkFaHg 26 
                 C+ +++ G+C  Gd C F+Hg
  TEY12490.1  94 CPEYRK-GHCGKGDACEFSHG 113
                 ******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MMMGTIDIPP RRQHQLLLSR SPTAAAFSKF LPCNDADDSD DEPYASDHFR IYEFKVRKCS  60
RSRSHDWTDC PFAHPGEKAR RRDPRRFCYS GLVCPEYRKG HCGKGDACEF SHGVFECWLH  120
PSRYRTEACK DGKACKRKVC FFAHSSRQLR LVPDPELAPD DKRKSSTHCC AYCHHDLKSS  180
PTSTLMGHMA QNISPPMSPL YRGDIGNDMG FGSLDSYKDA LAELMVSFEA MSPSEAVGRP  240
QGGLPWLDVN FNVEEPQFVM SPSTSTPVSR GHSKFYSGES KFIQGEYSGR NLMNESRFNA  300
GEGVSGGPDL GWVNDLLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03790.17e-81C3H family protein