PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY12362.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family ARF
Protein Properties Length: 922aa    MW: 102352 Da    PI: 6.3185
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY12362.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.27.3e-24170271199
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d+++++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   ++++ +l
  TEY12362.1 170 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHNNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNEKNQL 264
                 99*****************************8544444..48************************************************..8899999 PP

                 EEEEE-S CS
          B3  93 vvkvfrk 99 
                 +++++r+
  TEY12362.1 265 LLGIRRA 271
                 ****997 PP
2Auxin_resp119.92e-39296379183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 aahaa+t+s F+++YnPras+seFv++++k+ ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sd+dpvrWpnS+Wrs+k
  TEY12362.1 296 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYIKAVHhTRVSVGMRFRMLFETEESSVRRYMGTITGISDSDPVRWPNSHWRSVK 379
                 79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 922 aa     Download sequence    
MKLSACLNQQ SPEGEISLSS LLFLCIDGLG LLNCEILTYT YWRKLMWNLD LFYAFLREKS  60
CLNSELWHAC AGPLVSLPSL GSHVVYFPQG HSEQVAVSTN KEVDAQMPNY QSLPAQLVCQ  120
LHNVTMHADI ETDEVYAQMT LQPLNAQEQK EVSFLPADMG AASKQPTNYF CKTLTASDTS  180
THGGFSVPRR AAEKVFPPLD FSQQPPAQEL IARDLHNNEW KFRHIFRGQP KRHLLTTGWS  240
VFVSAKRLVA GDSVLFIWNE KNQLLLGIRR ANRPQTVMPS SVLSSDSMHL GLLAAAAHAA  300
ATNSRFTIFY NPRASPSEFV IPLAKYIKAV HHTRVSVGMR FRMLFETEES SVRRYMGTIT  360
GISDSDPVRW PNSHWRSVKV GWDESTAGER QPRVSLWEIE PLTSFPMYPS PFPLRLKRPW  420
PSGMKIDDMG LNPSLMWLRG DGGMQALNQG MGVSPWMQPR FDASMLGMQN DIYHAMAAAA  480
MQDMRVMDPS KQMLSPIMQF QQPQSIGSRS AGFMQQPQSS APFVQSLQGI QSQAMSQSHE  540
NLLQQQLLQQ NSFNDAQIHQ QQQQQHSNQT QHVVDPQLSQ LSSNSQVQSQ TMHSMSSMQQ  600
CFPESNVKPV GNMSSPLHSL LSSVTQEEAS NLLNVSRSNN LLSSSGWPTK RVALDPLSSG  660
IPSQTISPRA DQLGLLNSNA TSNPVSLPPF PGRDCLMEQE ANNDPHNHFL FGVNIDSSSL  720
LMPNGLSNLK AVSEPDNAAM TFASSSYMTS SGADYSINHA VTSSSCIDDS GFLISNDNGG  780
HNDPADRTFV KVHKTGSFGR SLDITKFSSY PELRSELAQM FGLEGELEDP LRSGWQLVFV  840
DREKDVLLLG DDPWQEFVNS VWCIKILSPQ EVQEMGKQGL ELLNSIPLQR LPVQNGGCDS  900
YGSRQEGRNM STGIPSVGSL DF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.20.0ARF family protein