PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY12298.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 207aa MW: 23209.8 Da PI: 10.4449 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 71.8 | 5.8e-23 | 19 | 67 | 1 | 49 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 k ie++ r+vtfskRr+g++KKA ELSvLC++++a+iifs g+ y + TEY12298.1 19 KLIEDENARTVTFSKRRAGLFKKATELSVLCGTQIALIIFSLGGRAYSF 67 569**************************************99999887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
MAPPQGKKKS QGRRKIEMKL IEDENARTVT FSKRRAGLFK KATELSVLCG TQIALIIFSL 60 GGRAYSFGHP DVESIIGRFF NKNPTATVPE SSSSSRYRTA MLQEMKEQFD GKSQELETKK 120 KRGKEIEAAL ESSSFHTTDE ELDGLDFEQL RQLRGKLVKM RDEMRRLANA NAYAVANVPP 180 MPVPMLNLAQ VAKSRGASMI PSDWLKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34440.1 | 8e-33 | M-type_MADS family protein |