PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY12261.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family Trihelix
Protein Properties Length: 315aa    MW: 35490 Da    PI: 6.1923
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY12261.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix49.79.7e-1622112186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +Wt++ + +L++   ++  +l+rg+l++++W+ev++++     + ++ +r+ +qCk++++ l+k+yk ++++  + +   +s++p+f+ l+
  TEY12261.1  22 CWTEEATSTLVDTWGQRYLELNRGNLRQKDWQEVANAVnalhgHTKKTRRTDVQCKNRIDTLKKKYKTERTRIAESNGALTSSWPFFSTLD 112
                 8****************************************999999************************99999888889******998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MGDLTESSTP QPPRQGPFRE DCWTEEATST LVDTWGQRYL ELNRGNLRQK DWQEVANAVN  60
ALHGHTKKTR RTDVQCKNRI DTLKKKYKTE RTRIAESNGA LTSSWPFFST LDHLIGSNFN  120
KHLQSKVITS AVPISSAQSS PPLSLPAPPL AVPLSYRKPM SPAMVTPISL QKRPMLSPAM  180
DKSFFRKNYS AMAAAAAAAD DEADDEDELE GDEVEGSEDG AEEEEEVGQE GTRRLAKAIE  240
KFGEIFEKVE GMKQRQLVEL EKQRMQFAKD LEVQRMQLFM DTQVQLEKVK RAKRPGSSDG  300
RWERTCNLKS LVVDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.19e-61Trihelix family protein