PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY12202.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

ARF

Protein Properties

Length: 658aa MW: 74020.5 Da PI: 6.9543

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY12202.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	60.4	3e-19	50	159	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..........EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliy........rkksgryvltkGWkeFvkangLkegDfvvFkld 85 f+k+lt sd++++g +++ +++a+e+ + ++ +++l+ +d++g++W++++i+ +++++r++l++GW+ Fv++++L ++D ++F TEY12202.1 50 FCKTLTASDTSTHGGFSVLRRHADEClppldmSWQP-PTQELVAKDLHGQEWRFRHIFrgqfgsemSGQPRRHFLQSGWSVFVSSKRLVARDAFIFL-- 145 99**************************973333.3459***********9999999999999999**********************.. PP SSSEE..EEEEE-S CS B3 86 grsefelvvkvfrk 99 + +++el+ +v+r+ TEY12202.1 146 RGEDGELRAGVRRA 159 4499999999985 PP
2	Auxin_resp	114.2	1.2e-37	184	266	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t+ +F+v+Y+Pr+s++eF+v+++++++++k+++s+ mRfkm+fe+e+++++r++Gt+v+++d+dp rW+nSkWr+Lk TEY12202.1 184 AWHAIQTNAMFTVYYKPRTSPAEFIVPYDQYMDSIKKNYSIEMRFKMRFEGEEAPKQRFTGTIVDTEDADPNRWKNSKWRCLK 266 89*******************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 658 aa Download sequence
MPVYNLPSKI LFRVVNVQLK AEADTDEQDE NVERKEPPPP PAAHFHVFSF CKTLTASDTS 60 THGGFSVLRR HADECLPPLD MSWQPPTQEL VAKDLHGQEW RFRHIFRGQF GSEMSGQPRR 120 HFLQSGWSVF VSSKRLVARD AFIFLRGEDG ELRAGVRRAM RQQGNVPSSV ISSHSMHLGV 180 LATAWHAIQT NAMFTVYYKP RTSPAEFIVP YDQYMDSIKK NYSIEMRFKM RFEGEEAPKQ 240 RFTGTIVDTE DADPNRWKNS KWRCLKVRWD ETSAIVRPER VSPWKIEQTL SPPALNPVPV 300 PRPKRPRSSA LPSSSDSSVL TREVLFISVF SLLEELLLEL YNLIISGPTK LTADPAPVNN 360 GSPLVLQGEE SLTLTGTFSE NNELGSSEKS CLWKPSLEDE KIDFSASRRY GVDNWSPLGR 420 SESSFTDLLS GFGLKTNVPR DLSMPIGNQA NSKRQTLECD ANMKNHVQGT EASYLDRGGG 480 RHGAFGDFSM ISDPRGDNQA SNWSMPPAVS TCLQMRPSQP RELMPKPIFA EQHGAMKPKE 540 GNCKLLRPDQ SKGLKMGDHG VSASDQENQF QFFHPSATER ETIGHSGSTR SCTKVQKQGS 600 ALGRSVDLAK FNNYDELISE LDNLFEFKGE LKARKKNWLV VYTDDEDDMM LVGDDPWA

Sequence ? help Back to Top

Protein Sequence Length: 658 aa Download sequence

MPVYNLPSKI LFRVVNVQLK AEADTDEQDE NVERKEPPPP PAAHFHVFSF CKTLTASDTS  60
THGGFSVLRR HADECLPPLD MSWQPPTQEL VAKDLHGQEW RFRHIFRGQF GSEMSGQPRR  120
HFLQSGWSVF VSSKRLVARD AFIFLRGEDG ELRAGVRRAM RQQGNVPSSV ISSHSMHLGV  180
LATAWHAIQT NAMFTVYYKP RTSPAEFIVP YDQYMDSIKK NYSIEMRFKM RFEGEEAPKQ  240
RFTGTIVDTE DADPNRWKNS KWRCLKVRWD ETSAIVRPER VSPWKIEQTL SPPALNPVPV  300
PRPKRPRSSA LPSSSDSSVL TREVLFISVF SLLEELLLEL YNLIISGPTK LTADPAPVNN  360
GSPLVLQGEE SLTLTGTFSE NNELGSSEKS CLWKPSLEDE KIDFSASRRY GVDNWSPLGR  420
SESSFTDLLS GFGLKTNVPR DLSMPIGNQA NSKRQTLECD ANMKNHVQGT EASYLDRGGG  480
RHGAFGDFSM ISDPRGDNQA SNWSMPPAVS TCLQMRPSQP RELMPKPIFA EQHGAMKPKE  540
GNCKLLRPDQ SKGLKMGDHG VSASDQENQF QFFHPSATER ETIGHSGSTR SCTKVQKQGS  600
ALGRSVDLAK FNNYDELISE LDNLFEFKGE LKARKKNWLV VYTDDEDDMM LVGDDPWA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62000.3	0.0	ARF family protein