PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY12118.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | LBD | ||||||||
Protein Properties | Length: 222aa MW: 25238.2 Da PI: 8.6705 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 105.7 | 3.8e-33 | 9 | 108 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 aCa+Ck++r++C+++C+lap fp e++++f++vhk+FG+snv+k++++l+ee+r+ a++slv+eA r++dPv G +g ++++ ++l+ k++ ++ ++ TEY12118.1 9 ACASCKHQRKRCTEKCTLAPFFPVERTREFQAVHKVFGVSNVTKIITSLREEDRKVAVDSLVWEALGRQKDPVLGPFGDYRRVCEELRLYKSQYQHFHH 107 7******************************************************************************************99998888 PP DUF260 100 e 100 + TEY12118.1 108 Q 108 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MQRANNTSAC ASCKHQRKRC TEKCTLAPFF PVERTREFQA VHKVFGVSNV TKIITSLREE 60 DRKVAVDSLV WEALGRQKDP VLGPFGDYRR VCEELRLYKS QYQHFHHQVP NQGTIVYKAA 120 TAQALMGWNN SNKIVNTNTN NPNNNFIGNG NSVVDFCTYG YSPNHHIHQD SEKQRAEREN 180 GTTIFLPQQH LSNAFSQQCI LAGQYNPLDS KSMESTLWEG SS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06280.1 | 3e-46 | LBD family protein |