PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY11713.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | Trihelix | ||||||||
Protein Properties | Length: 242aa MW: 26776.2 Da PI: 9.8719 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 64.9 | 1.7e-20 | 34 | 120 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +Wt +e+ aLi+a+++++ +l+rg+l++++W+ev++ + ++++qC++k+e+l+kry++ +++ r+ s s++++f+q++ TEY11713.1 34 CWTPEETVALIDAYKDKWYSLSRGSLRGHHWQEVADDVasrcP-AHPAKTSVQCRHKMEKLRKRYRADIQRSAARR--SASSWAHFQQMH 120 8*************************************64322.2337899***************9888888875..5556*******8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 242 aa Download sequence |
MATIISPSSP DDIPTATLAL PTPTPAPRRL PPPCWTPEET VALIDAYKDK WYSLSRGSLR 60 GHHWQEVADD VASRCPAHPA KTSVQCRHKM EKLRKRYRAD IQRSAARRSA SSWAHFQQMH 120 SMEKGTDIPT PPPSSSSEED EEEHNTKSNS VKRRINDLYN RHANQSSAST PGVRIKMPGA 180 AAKPPNPNPR LIPNSSGSHK SKPGLKAGPE HLIALNTVLE SPFKAMEVFS CPKRMLQLDG 240 ED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G44730.1 | 4e-32 | Trihelix family protein |