PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY11672.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C3H
Protein Properties Length: 326aa    MW: 36635.2 Da    PI: 8.0348
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY11672.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.91.3e-06326226
                -S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHg 26
                k+++C+ffa  G C  G+ C FaH+
  TEY11672.1  3 KRVICKFFAH-GACLKGEHCEFAHD 26
                99****6666.*************5 PP
2zf-CCCH26.11.5e-083454526
                --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                +C f+++ G+C yG+rC++ H+
  TEY11672.1 34 ICTFYQK-GICTYGSRCRYEHV 54
                7******.***********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MSKRVICKFF AHGACLKGEH CEFAHDWKAP SSNICTFYQK GICTYGSRCR YEHVKLSPSS  60
SDSPLPVVSG TAVSATDLAR NVSPPSGHHD MLNDDNLMGH SNDAGPSGYA MCSFAAVGDC  120
PRGEDCPHIH GDVCPICEKR CLHPFRPQER EEHLRSCEKR RKHLEALRCS QDIECSVCLE  180
AVLSKPTSAE RKFGILSECD HSFCILCIRN WRSSSPSSGI HVNSAIRACP ICRRLSYFVI  240
PSVVWYSSSE EKQEIIQSYK TKLRFIDCKH FDFGNGTCPF GTSCFYKVYS LMHFKMVILR  300
KLLYAMLAVM TEITVIANDI KDLRLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G08505.11e-131C3H family protein