PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY11628.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family Trihelix
Protein Properties Length: 371aa    MW: 42584.7 Da    PI: 8.9802
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY11628.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix42.81.4e-1343122286
    trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 W+++e laL+++r+ +e ++++       We+vs+k+ e g++rs++ Ck+k+e++++++    + + +  +e  ++  + +++e
  TEY11628.1  43 WSNDELLALLKLRSTTEIWFSDF-----TWEHVSRKLGELGYKRSAVDCKDKLEEVSRQFSSSSNKNYNDLDEMYQEAHHIQEME 122
                 *********************98.....9********************************999999887666666666666665 PP
2trihelix95.64.5e-30272354185
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                 rW+++ev aLi++r e++   ++g+ k+plWe++s+ mre g++rs+k+Ckekwen+nk+++k+k+++kkr s +s+tcpyf+ql
  TEY11628.1 272 RWPREEVVALINLRCETGG-GGEGSNKGPLWERISQGMREMGYKRSAKRCKEKWENINKYFRKTKDSSKKR-SVNSRTCPYFHQL 354
                 8**************9976.57888*********************************************8.78888*******9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MFDGSEQFIA SSRASSSFHG NPSFDPYAPP LHLHNNHRSA DPWSNDELLA LLKLRSTTEI  60
WFSDFTWEHV SRKLGELGYK RSAVDCKDKL EEVSRQFSSS SNKNYNDLDE MYQEAHHIQE  120
MEDQDPTAKK PQDVIINPTM KRKRRDKLDK FKGFCEAVVS KMMSKQEELH RKLIDDIVTR  180
DEERIAREDA WRIQETKRIQ TEIETRAKEQ KSAAERQAVI IQFLKQFTTT PEENQTGKFD  240
TNTNTSSKTN SNSSSSLCKG TPPQTPVVAG RRWPREEVVA LINLRCETGG GGEGSNKGPL  300
WERISQGMRE MGYKRSAKRC KEKWENINKY FRKTKDSSKK RSVNSRTCPY FHQLSCLYGD  360
GTIVAPNAAG D
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1142147RKRRDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28300.12e-57Trihelix family protein