PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY11601.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C2H2
Protein Properties Length: 296aa    MW: 32428 Da    PI: 6.6756
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY11601.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.00023115137123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C+ C + Fs++  L  H++ H
  TEY11601.1 115 FSCKFCRREFSTSQALGGHQNAH 137
                 89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MEALDIKLKP YDVSEPLSKE PCHSDGSVTS DESSTRARSY LTDDVEGTGH ETLTACVFLD  60
IKHEEPESPT SKEECTRYET DTSRVSLDLK LASDQDEGTS PRESNDLEQL AKKTFSCKFC  120
RREFSTSQAL GGHQNAHRQE RAAVKHRHKM VDAAVAGPTR IQYGHPYYPY LAYPNFNRSI  180
GVRAQSMIRK PYSNYSQAMA RHLAQEKMSR AYLLRPSPSM QVDGSLNLRG NPNQRLGLRD  240
GGFLSLGGNP NSAAIKDVAI DNGHQWLGLG VGGGGGGGGG GDQQEAAKEL DLELKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.17e-17C2H2 family protein