PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY11496.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GATA

Protein Properties

Length: 279aa MW: 30073.9 Da PI: 7.9554

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY11496.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	55.4	8.5e-18	185	219	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +C++ kTp+WR gp g+ktLCnaCG++y++ +l TEY11496.1 185 CLHCQAEKTPQWRAGPMGPKTLCNACGVRYKSGRL 219 99*****************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MEILDPAGAC FTDDFLNFNL EGEEESHTIF KGASALKAPK AAAGLGRGPL PGPFPEFVEE 60 EELEWLSNKD AFPSVETCFG ILADNPELVM SHQSPISVLE NSSSSSSHSN ASSGSVASCC 120 NSLKVPTNYP VRARSKRRRR RTGYGNLPSQ QQLLWLNPVS IKTKKEVVSS FVLAPSPAGG 180 MGRRCLHCQA EKTPQWRAGP MGPKTLCNAC GVRYKSGRLL PEYRPASSPT FSSVLHSNSH 240 RKVVEMRKQK HVPVVDGDGD GDGDGDGVEV NVACGYRLG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	136	141	KRRRRR
2	136	164	KRRRRRTGYGNLPSQQQLLWLNPVSIKTK
3	137	165	KRRRRRTGYGNLPSQQQLLWLNPVSIKTK
4	137	142	RRRRRT
5	138	166	KRRRRRTGYGNLPSQQQLLWLNPVSIKTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32890.1	1e-39	GATA family protein