PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro07_G34179 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | FAR1 | ||||||||
Protein Properties | Length: 174aa MW: 20290.4 Da PI: 10.226 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 59.7 | 9.4e-19 | 13 | 98 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y++Y+ + GF+ rk+k +++ +ng ++k ++Csk+g+r+ +kk + + + + tr+gCka++ +++++gk+++ +le nHel Ro07_G34179 13 AYDKYGGKKGFNARKQKRNRN-KNGLVVKLSYCCSKQGQRKINKKC--EPSYSVPITRVGCKAHMSCRLQNNGKYKIVSLERTYNHELK 98 59**************99998.8888****************9998..89999**********************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MEFSSDHESA YKAYDKYGGK KGFNARKQKR NRNKNGLVVK LSYCCSKQGQ RKINKKCEPS 60 YSVPITRVGC KAHMSCRLQN NGKYKIVSLE RTYNHELKEV YTSEIFKLFK QQYKRIGDYV 120 ANKVSKFDMK YEYKVSYRGI AREHLVKFDV LLQTITYLSI TLDSLFSALS VLNS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 8e-10 | FAR1 family protein |