PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro07_G33896 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | NF-YC | ||||||||
Protein Properties | Length: 102aa MW: 10811.2 Da PI: 9.2925 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 23.9 | 9e-08 | 6 | 34 | 18 | 46 |
NF-YC 18 nhelPlarikkilkadedvkmisaeaPvl 46 ++++P arikki+++dedv +i+ +P l Ro07_G33896 6 DTRFPAARIKKIMQTDEDVGKIALAVPLL 34 5789**********************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 102 aa Download sequence |
MRKKLDTRFP AARIKKIMQT DEDVGKIALA VPLLDIVSKV PDLGGSDAAG EDCPVAKRRK 60 VAADDEDTES DDEAKRSKMM NDPGNTISSG RGRGRAGAGG GR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19490.1 | 3e-17 | NF-YC family protein |