PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro07_G15725
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family bZIP
Protein Properties Length: 315aa    MW: 35049.3 Da    PI: 6.2691
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro07_G15725genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1254e-085276226
                 XXXCHHHCHHHHHHHHHHHHHHHHH CS
       bZIP_1  2 kelkrerrkqkNReAArrsRqRKka 26
                 k+ k  rr+++NReAAr+sR+RKk 
  Ro07_G15725 52 KDQKTLRRLAQNREAARKSRLRKKS 76
                 567899*****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MENWEEPTMA DSPRTDISAD ADTDDKNQRY DRDQYAINAA VSDSSDKSKD PKDQKTLRRL  60
AQNREAARKS RLRKKSTKHL SILLLRKPAY VQQLETSRLK LSQLEQELQR ARQQGIFISS  120
AGGDAAHSTS GNGAMVFDVE YGRWLEDQNR QVNELRSAVN SHASDAELRI IIDGILAHYD  180
EIFRLKGTAA KADVFHLLSG MWKTPAERCF LWLGGFRSSE LLKLLVNQLE PLTEQQLVGI  240
TNLQQSSQQA EDALSQGMEA LQQSLAETLS SGSLGSSGSS GNVANYMGQM AMAMGKLGTL  300
EGFIRQTEHL DFLKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.11e-127bZIP family protein