PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ro07_G06896

Organism

Rubus occidentalis

Taxonomic ID

75079

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus

Family

Dof

Protein Properties

Length: 303aa MW: 33182.4 Da PI: 8.468

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ro07_G06896	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.9	1.1e-38	36	96	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 k++al+cprC+st tkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rkn+k+s Ro07_G06896 36 KDQALNCPRCNSTTTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNNKRS 96 7899*****************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MDTAHWPQGI GVVKSMGAEG SSDSRPILER RGRPQKDQAL NCPRCNSTTT KFCYYNNYSL 60 SQPRYFCKTC RRYWTEGGSL RNVPVGGGSR KNNKRSSTSS SSSPSTSNSS KKLAHQDLVM 120 TQQSGDSRNP KIHQGQDLNL AYPPTSDHDY DHHSIFNPSS SAISTSSPLN LSAMELLKST 180 GINASRGLMN SFMAPMSVQD SNNITMFSSG HQGFPNLQEF KPSLSFSLDG YDSGYLRGVQ 240 ETSHHQARLL FPNDQDLKQI PSITNAATTT TTTTTSTDHF EQNSGEGDHS GVYWNGMLGG 300 GSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64620.1	4e-44	Dof family protein