PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ro06_G14893

Organism

Rubus occidentalis

Taxonomic ID

75079

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus

Family

bZIP

Protein Properties

Length: 452aa MW: 49302.1 Da PI: 6.6108

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ro06_G14893	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	44.3	4e-14	352	404	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r+rr++kNRe+A rsR+RK+a++ eLe + +L +eN Lk+ l el+ + + Ro06_G14893 352 RRQRRMIKNRESAARSRARKQAYTVELEAELNQLREENAHLKQALAELEMKRK 404 79****************************************99999987655 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MSGVSESEMI SHDKEESPLL SDQHAKNNQL FTSLGRQSSI YSLTLDEFQH TLCENGKNFG 60 SMNMDEFLNS IWTAEENQAI NSTHQNNINI LNANHINNIS NNNVQHVALG EVTTEKKGMI 120 AKQPSLARQG SLTLPGPLCR KTVDEVWSEI HKGRKKQAQE QQENSNHNNS YDGVQNSEFV 180 PRQPTFGEMT LEDFLVKAGV VREPDSMSVA PLPPQPQQQP QQYGIVGQSF VMGMGANAGG 240 GSTSTTPVLP NYQTIPQGGA PVVESSGYAT NGKRNGAPPP LAVSFGGRVV NGGGGYAPAQ 300 PIGMATPVSP VSSDGMCASQ VENSGGQYGM DMGALRGRKR IIDGPVEKVV ERRQRRMIKN 360 RESAARSRAR KQAYTVELEA ELNQLREENA HLKQALAELE MKRKQQMNIV LRRNEKKSSK 420 QQGPESYGEA VDAAEESQLL CVMQSIDVNT LG

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MSGVSESEMI SHDKEESPLL SDQHAKNNQL FTSLGRQSSI YSLTLDEFQH TLCENGKNFG  60
SMNMDEFLNS IWTAEENQAI NSTHQNNINI LNANHINNIS NNNVQHVALG EVTTEKKGMI  120
AKQPSLARQG SLTLPGPLCR KTVDEVWSEI HKGRKKQAQE QQENSNHNNS YDGVQNSEFV  180
PRQPTFGEMT LEDFLVKAGV VREPDSMSVA PLPPQPQQQP QQYGIVGQSF VMGMGANAGG  240
GSTSTTPVLP NYQTIPQGGA PVVESSGYAT NGKRNGAPPP LAVSFGGRVV NGGGGYAPAQ  300
PIGMATPVSP VSSDGMCASQ VENSGGQYGM DMGALRGRKR IIDGPVEKVV ERRQRRMIKN  360
RESAARSRAR KQAYTVELEA ELNQLREENA HLKQALAELE MKRKQQMNIV LRRNEKKSSK  420
QQGPESYGEA VDAAEESQLL CVMQSIDVNT LG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	286	294	GGRVVNGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36270.1	1e-106	bZIP family protein