PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro06_G04867 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | HSF | ||||||||
Protein Properties | Length: 118aa MW: 14074.2 Da PI: 5.2376 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 31.4 | 5.1e-10 | 24 | 88 | 2 | 65 |
HHHHHHHHHCTGGGTTTSEES.SSSSEEEES-HHHHHHHTHHHHST.T--HHHHHHHHHHTTEEE- CS HSF_DNA-bind 2 Flkklyeiledeelkelisws.engnsfvvldeeefakkvLpkyFk.hsnfaSFvRQLnmYgFkkv 65 F+++l+++le ++l++lisw+ ++ f v d++ f++ v+p++F +f+ F + L + gFk+ Ro06_G04867 24 FIRQLFDVLEMDNLRDLISWNhNDDCRFTVRDKDLFSN-VIPTHFTgVGSFNRFEQMLRIHGFKRY 88 9********************777799***********.9999997357899999999****9975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 118 aa Download sequence |
MDEVEVKEEP VELEAEVPPQ PILFIRQLFD VLEMDNLRDL ISWNHNDDCR FTVRDKDLFS 60 NVIPTHFTGV GSFNRFEQML RIHGFKRYGL EFWHKDRMLC RDRPLLLPVI KKEPAFAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67970.1 | 1e-06 | HSF family protein |