PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro06_G04859 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | bZIP | ||||||||
Protein Properties | Length: 221aa MW: 25341.8 Da PI: 6.6507 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 48.2 | 2.3e-15 | 100 | 150 | 5 | 55 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +++rr+++NRe+ArrsR RK++ ++eL v L +eN++L ++l++ ++ Ro06_G04859 100 RKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLVDKLNHVSES 150 689***************************************999998775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MQPGEATGLH YLVPSSSSSS PYPPHFSMMS TTTQSNTASA FHFNRFATTP VYNHYQFPSH 60 LLPQEVNNNN NNHPQQPSSF SSNSTSDEAD EQQLSLINER KQRRMISNRE SARRSRMRKQ 120 KHLDELWSQV VWLRNENHQL VDKLNHVSES HDRVVQENAQ LKEEASELRQ MLSDLQLHSP 180 NSNYHPSLRD QLEVDVPCNT AYLRAESSNQ PITTSSMDLL G |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 113 | 120 | RRSRMRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 3e-48 | bZIP family protein |