PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro05_G24442 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | B3 | ||||||||
Protein Properties | Length: 182aa MW: 20122.1 Da PI: 8.925 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 44.5 | 2.7e-14 | 91 | 162 | 32 | 98 |
--SEEEEEETTS-EEEEEE.....EEETTE....EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 32 esktltledesgrsWevkliy...rkksgr....yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ++kt++led++g+sW v l++ kk gr lt+GW + + an++ gD+++F+l+++s +++++fr Ro05_G24442 91 NKKTVKLEDPTGKSWPVSLCVskyYKKNGRlyesLDLTAGWTQVCVANKISPGDTIIFELVKQSV--MKIHIFR 162 4579***************7766555555567778899*********************987554..4888887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
MCDRLTNVIL EVLVDNAGYD GESKFNVTIY DRSACEKDVE VAKTRSNSSV SLGSNGNQAQ 60 VKEEVVDLET ENYYNNKGFP KELGVAKSLM NKKTVKLEDP TGKSWPVSLC VSKYYKKNGR 120 LYESLDLTAG WTQVCVANKI SPGDTIIFEL VKQSVMKIHI FRVGRMGGKG CSVRLVAPNV 180 KS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24700.1 | 7e-10 | B3 family protein |