PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro05_G18736 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | ZF-HD | ||||||||
Protein Properties | Length: 231aa MW: 24669.6 Da PI: 9.2339 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 102.9 | 2.2e-32 | 25 | 79 | 3 | 58 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 ++rY+eClkNhA+++Ggha+DGCgEf+++ g+egt +alkCaAC+CHRnFHR+e++ Ro05_G18736 25 TIRYRECLKNHAVNIGGHALDGCGEFLAA-GDEGTLDALKCAACNCHRNFHRKEPA 79 78**************************9.999********************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MGPTSGGGGE STARKRGTTV STVSTIRYRE CLKNHAVNIG GHALDGCGEF LAAGDEGTLD 60 ALKCAACNCH RNFHRKEPAE GGGGALHPHH HNQLAQQPFS AYYRHPYPPP PSGYLHLTPA 120 QQPYRPLALP AAASGGGGGG SHSREEVEDV SNPSSSGGGG GSGVGLLKKR FRTKFTAEQK 180 EKMVEFAEKV GWRIQKHDEA AVEEFCAESG VKRQVLKVWM HNNKHTIGKK P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24660.1 | 8e-72 | ZF-HD family protein |