PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro05_G15621 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | ERF | ||||||||
Protein Properties | Length: 158aa MW: 17001.8 Da PI: 5.926 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.3 | 1.4e-16 | 18 | 67 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++kGVr++k +g+Wv+eIr+p g + r +lg+f tae Aa a++ a +l++ Ro05_G15621 18 KFKGVRQRK-WGKWVSEIRVP---G-TqDRLWLGSFSTAEAAAVARDVAYYCLRK 67 89******9.**********8...3.35*************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 158 aa Download sequence |
MSYSSEDSSS PTNAGRQKFK GVRQRKWGKW VSEIRVPGTQ DRLWLGSFST AEAAAVARDV 60 AYYCLRKPST LEGLNFPTAL PCSVNQAVDK SPRSIQKAAS DAGMAVDAQL VNANGSWQPH 120 DGRQTNGSEP RGMQTGGCWE DAGESGGEAL SISIEDYL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22810.1 | 5e-38 | ERF family protein |