PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro05_G11051 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | MYB_related | ||||||||
Protein Properties | Length: 108aa MW: 12278.1 Da PI: 9.2645 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.8 | 3.3e-10 | 48 | 85 | 1 | 39 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkq 39 +g W++eEd+ ++++v++ G ++W Ia+ ++ g +kq Ro05_G11051 48 KGYWSKEEDDCIIKLVEKNGARRWFVIAKFLP-GQIGKQ 85 789*****************************.877765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 108 aa Download sequence |
MRGGCSSLWV VNVPAQTTLY ETTAGIPGRS DVQCLHHWQK VLNPEIIKGY WSKEEDDCII 60 KLVEKNGARR WFVIAKFLPG QIGKQSEKVI YGYKSQSVSF RRSSTLCE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11510.1 | 1e-25 | MYB family protein |