PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro05_G03220 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | bHLH | ||||||||
Protein Properties | Length: 91aa MW: 10362.7 Da PI: 6.5117 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 23.4 | 1.1e-07 | 15 | 54 | 15 | 54 |
HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +i++ +L+ llP+ + +++ +s ++iLe+++ YIk L Ro05_G03220 15 EIKELVVKLQALLPQHNHRRNTTVSASTILEETCSYIKRL 54 67888889*******6699*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 91 aa Download sequence |
MSSQRTRASQ PTENEIKELV VKLQALLPQH NHRRNTTVSA STILEETCSY IKRLHKEVGD 60 LSQRLSQLLH DSADIAEVDE ELITRLLSNI N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47710.1 | 4e-20 | bHLH family protein |