PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro04_G37042 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | TCP | ||||||||
Protein Properties | Length: 88aa MW: 9979.06 Da PI: 9.8218 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 54.8 | 3.8e-17 | 24 | 78 | 8 | 69 |
TCP 8 hskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssss 69 h k +T++g+Rd+R Rlsa++a++f+d+q+ LG+d++sk + kp i +l ++s+++ Ro04_G37042 24 HNKFYTSKGPRDKRFRLSAQTAIEFYDVQEHLGYDRPSK-------ATKPTIEALGDSSATH 78 99*************************************.......5566666665554444 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 88 aa Download sequence |
NNGRYGRIVK VQGGHVDTLF DQLHNKFYTS KGPRDKRFRL SAQTAIEFYD VQEHLGYDRP 60 SKATKPTIEA LGDSSATHHE STMNNLSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31070.1 | 4e-21 | TCP family protein |