PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro04_G06421 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | NF-YB | ||||||||
Protein Properties | Length: 179aa MW: 20526.1 Da PI: 7.9862 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 161 | 1.7e-50 | 38 | 131 | 3 | 96 |
NF-YB 3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 +qd++lPianv+rimk++lP nakisk+aket+qecvsefisfvt+eas+kc++e+rkt+ngdd++wal+tlGf++y pl+ yl +yr+ eg+ Ro04_G06421 38 QQDQLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASEKCRKERRKTVNGDDICWALGTLGFDEYTGPLRRYLYRYRDQEGA 131 79****************************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence |
MRHEFRLPAI KNNADPSPKH QSSNRQSKAS SAPNICDQQD QLLPIANVGR IMKQILPPNA 60 KISKEAKETM QECVSEFISF VTGEASEKCR KERRKTVNGD DICWALGTLG FDEYTGPLRR 120 YLYRYRDQEG ADHQHRAIND NEDKLKLLAN NNILGSDQAP RMMMVMNQYD HPDHDIQKT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47810.1 | 2e-53 | NF-YB family protein |