PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ro04_G02648

Organism

Rubus occidentalis

Taxonomic ID

75079

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus

Family

bZIP

Protein Properties

Length: 459aa MW: 51177.1 Da PI: 6.6801

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ro04_G02648	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.6	3.7e-10	174	215	4	45
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k+ rr+++NReAAr+sR+RKka++++Le+ +L++ ++L Ro04_G02648 174 QKALRRLAQNREAARKSRLRKKAYVQQLENSRLKLSQLEQEL 215 5889*************************9877777766655 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MQSFKAVSTN PELYPHSSFY FRGDDNQTRF ADLGELEHSA TVFPHDDAVD LSPSSMFSLK 60 ANNNNIAVVP NNLHYATLNT SPGCLDIGST LSGTGGEQQY MYHHHQKGTT SSGGNNGHFE 120 NWGDSAMAEH SQQTDTSTDI ETDDKNHLRG AQHGALVVVD SNSIEQARGR TGDQKALRRL 180 AQNREAARKS RLRKKAYVQQ LENSRLKLSQ LEQELQRARQ QGMFVGLSGD HGNSMAGSGA 240 LTFDFEYARW LDEHQRLIHE LRSAVNSHLV DNGLRIHVDS VMTHYDEIFR LKSLAAKADV 300 FHMLSGMWKT PAERCFMWLG GFRSSELLKI LGNQLEPLTD QQLMGICNLQ QSSQQTEDAL 360 SQGMEALQQS LVDTLSSTTH GSTGSADVAD YMGQMAIAMG KLATLQDFLI QADLLRQQTL 420 QQLHRILTTR QAARALLVIN DYFSRLRALS SLWLARPRD

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MQSFKAVSTN PELYPHSSFY FRGDDNQTRF ADLGELEHSA TVFPHDDAVD LSPSSMFSLK  60
ANNNNIAVVP NNLHYATLNT SPGCLDIGST LSGTGGEQQY MYHHHQKGTT SSGGNNGHFE  120
NWGDSAMAEH SQQTDTSTDI ETDDKNHLRG AQHGALVVVD SNSIEQARGR TGDQKALRRL  180
AQNREAARKS RLRKKAYVQQ LENSRLKLSQ LEQELQRARQ QGMFVGLSGD HGNSMAGSGA  240
LTFDFEYARW LDEHQRLIHE LRSAVNSHLV DNGLRIHVDS VMTHYDEIFR LKSLAAKADV  300
FHMLSGMWKT PAERCFMWLG GFRSSELLKI LGNQLEPLTD QQLMGICNLQ QSSQQTEDAL  360
SQGMEALQQS LVDTLSSTTH GSTGSADVAD YMGQMAIAMG KLATLQDFLI QADLLRQQTL  420
QQLHRILTTR QAARALLVIN DYFSRLRALS SLWLARPRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68640.1	1e-136	bZIP family protein