PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro03_G33138 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | MYB_related | ||||||||
Protein Properties | Length: 317aa MW: 35693.4 Da PI: 4.5253 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.3 | 3e-12 | 14 | 47 | 1 | 35 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgR 35 +g+WT+eEd++lvd+++++G g+W+t ++ g g+ Ro03_G33138 14 KGPWTPEEDQKLVDYIQKHGYGNWRTLPKNAG-GL 47 79***************************999.65 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 317 aa Download sequence |
MGRAPCCDKN GLKKGPWTPE EDQKLVDYIQ KHGYGNWRTL PKNAGGLLLL LVCLEEPITK 60 SRTTGTPTFG RGFSEWESIR PRLDLLDFSS ILYNSSHHHH QVNFSRLLGM QQMGVNPELL 120 RLATSLLSSH RESNSNFFIQ NGQQQQLCNP QNDQIPVQLV QSSQLQEPFQ ENVPVCTTLD 180 TSSIPFAQEV QPSNLTDFSS QNCQISEWQS NGEAPSNFTE NQYVQLPSLT YYDGSSDHQI 240 IMDPSPETSN LYSNNSNNQN FSFTSVFSTP SSSPTPLNSN STTYFNSGTE DERESYCSNM 300 LKFDIPDILD VTDFIHV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21440.1 | 3e-30 | MYB family protein |