PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro03_G32501
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family bZIP
Protein Properties Length: 371aa    MW: 40753.4 Da    PI: 6.8063
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro03_G32501genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.32.3e-15291342556
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                  +r+rr++kNRe+A rsR+RK+a++ eLe +  +Le eN++Lk+++  +++  
  Ro03_G32501 291 RRQRRMIKNRESAARSRARKQAYTVELEAELNQLEDENTKLKQTVAGIEQRR 342
                  69****************************************9998888765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MLIKMVASDE SGSLGYDQNG DDNAKPQPLP SQQQHGESSK QNSIFALTLD EIQSKSGKSF  60
GSMNMDEFLA NIWSVDENQV ASEQPNQGDH EFDPANGKDT SSKPGSLSRQ GSFSIPTPLC  120
KKTVDEVWLE IDRTRPPPPP NDLSNNPGPP QRQQTIGEIT LEDFLVKAGV VHESPSQNLM  180
ESTPIHQQGG NSNDSNMVTS SSMYLGTSSE MGNNVIASGF LNPQNAVPNN FFGNGYVIAG  240
YPVFGQTKMV VGEASFGTGS EMEKCHSLPE SSGTKNKKRI IDGPLEVVVE RRQRRMIKNR  300
ESAARSRARK QAYTVELEAE LNQLEDENTK LKQTVAGIEQ RRKQEVMGRK QSTRAHKLAA  360
KLRTMRRTVS G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44460.16e-70bZIP family protein