PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro03_G31850 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | B3 | ||||||||
Protein Properties | Length: 258aa MW: 29517.7 Da PI: 10.3095 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 49.5 | 7.5e-16 | 106 | 185 | 6 | 96 |
..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 6 tpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 ++s+v ++g lp kf+e+h + + +l+lede+g++++ k+i ++++ l++GW+ F+ +++L++gD +vF+l++ ++ ++++ Ro03_G31850 106 VKSMVRSHG---LPTKFCEDHlpN----LDSELVLEDEDGNEYDSKYIAKRTG----LSGGWRAFALEHKLDDGDALVFELVEP--TRIKIHI 185 566677776...9********433....5569***************655555....***********************9864..3334444 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MVAASAYEEA RNKRLEQNKK KFQDLGITEV SKTLSDLTAS EKKPQQRVSR PKPKNTSFEV 60 EPRRSSRQRN PIPSYVDEVD IGLPTRKRLR SKELQENLQS ENPSFVKSMV RSHGLPTKFC 120 EDHLPNLDSE LVLEDEDGNE YDSKYIAKRT GLSGGWRAFA LEHKLDDGDA LVFELVEPTR 180 IKIHIVKVIS REHCKKDKVK SAGKPSKAAK KPKPESDQKQ RSKRATTPEI IDLKTPPELL 240 PESPKSEVVL PYRLRKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58280.1 | 2e-39 | B3 family protein |