PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro03_G24413 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | G2-like | ||||||||
Protein Properties | Length: 709aa MW: 77842.7 Da PI: 6.7026 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 103.2 | 1.6e-32 | 108 | 162 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt +LHerFv+av+qLGG+ kAtPk+i+++m+vkgLtl h+kSHLQkYRl Ro03_G24413 108 KPRLRWTADLHERFVDAVTQLGGAAKATPKAIMRTMNVKGLTLFHLKSHLQKYRL 162 79****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 64.5 | 2e-20 | 110 | 161 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++e++vdav+qlGg t+k+I+rtm+ kg+tl ++ks++qky+ Ro03_G24413 110 RLRWTADLHERFVDAVTQLGGAakaTPKAIMRTMNvKGLTLFHLKSHLQKYR 161 89******************99*****************************7 PP | |||||||
3 | G2-like | 94.5 | 8.3e-30 | 432 | 482 | 1 | 51 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQ Ro03_G24413 432 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQ 482 79************************************************* PP | |||||||
4 | Myb_DNA-binding | 56.5 | 6.4e-18 | 434 | 482 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 r+rWT e++e++vdav+qlGg+ t+k + r mg +g+t +++ks++q Ro03_G24413 434 RLRWTHELHERFVDAVAQLGGPdraTPKGVLRVMGvQGLTIYHVKSHLQ 482 89**********************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 709 aa Download sequence |
MTNEVGLQRE TREKSAEMDK SPKSVKKREA APSPFISLSR SHHLPNKIFT AARRRVEIGI 60 WRLQTDEMFP RLMQPPPHEG IVGQEDMQGH GNHNHRADPC LVLTSDPKPR LRWTADLHER 120 FVDAVTQLGG AAKATPKAIM RTMNVKGLTL FHLKSHLQKY RLGKQSGKDM DEVSKDASYL 180 LESPGTGNSS PNLPTSDMNE GYEVKEALRV QMEVQSKLHV QVEAEKHLQI RQDAERRYMA 240 MLERACKMLA DQFIGGSVID TDGHKCHGLG NKNPKSSSLD SLGFYSLQSA DVAGVHGLEE 300 EVLTSVHPQR ADCSTESCLT SHESPGGLTL EGSPGGGKKR MLSLESATAS LIWGEAKVRT 360 QEVDPHGITS VFNMYFSAVL SAQGPCNVWQ YGNSGLVQNN LFVHGQYLDC DTNTMDLANG 420 GNSPSNSNLA SKQRLRWTHE LHERFVDAVA QLGGPDRATP KGVLRVMGVQ GLTIYHVKSH 480 LQDPSLWCLD SLQMLMQGGK ADKKESGDML SNVDGSSGMQ ITEALKLQME VQRQLQLRIE 540 AQGKYLKKII EEQQRLGGVL SEAPGPGNST RASGDDCPES DQVDPATPAP TSECPIQDKA 600 IKERAPAKSL SVDESCSSRH EPLTPDSDCH VISPAESPKA ERPMKKQRFN MGEAFSNPEV 660 VLTHQILESS LTSSYQQAHT IFLPREQSNP SSGISGRNVD LEQVAGSDM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01060.1 | 1e-105 | G2-like family protein |