PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ro03_G22643

Organism

Rubus occidentalis

Taxonomic ID

75079

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus

Family

bZIP

Protein Properties

Length: 541aa MW: 59922.1 Da PI: 6.9616

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ro03_G22643	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.5	1.8e-10	237	278	4	45
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le +L++ ++L Ro03_G22643 237 AKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQDL 278 6889*************************9777777666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 541 aa Download sequence
MAFISATCPD SSFFLEYKDE NGLLRKSCMA ASHRVVGETG LSDSGPSSSN HHVPYATVLH 60 GINAPSTSFL NQEASAFDFG ELEEAIARQV RNDEAQAPLF TGRPAATLEM FPSWPMRFHQ 120 TPRVGSSKSA GGESTDSGSQ VNTTTLTSKG DQTQLEPESP ISKISSSSNH HHHPALDQNH 180 LQFQQQQQLQ QDMAISDTSR ATTVAATEAS KGQSAPKPTH EKRKGAGSTS ETKQLDAKTL 240 RRLAQNREAA RKSRLRKKAY VQQLESSRIK LTQLEQDLQR ARAQGLLMGG CGSGFGNISS 300 GAAIFDMEYA RWLEDDHRHM SELRTGLQAH LSDNDLRVVV DGYISHYDEI FQLKGVAAKS 360 DVFHLITGMW TSQAERCFLW MGGFRPSELI KMLIQQLDPL TEQQVMGIYS LQHSSQQAEE 420 ALTQGLDQLH QSLIDTIAGG PVIDGMQQMA VALGKLTNLE GFVRQADNLR QQTLHQLRRI 480 LTVRQAARCF LVIGEYYGRL RALSSLWASR PRESMMSDDN SCQTTTDLQM VQPSQNHFPS 540 F

Sequence ? help Back to Top

Protein Sequence Length: 541 aa Download sequence

MAFISATCPD SSFFLEYKDE NGLLRKSCMA ASHRVVGETG LSDSGPSSSN HHVPYATVLH  60
GINAPSTSFL NQEASAFDFG ELEEAIARQV RNDEAQAPLF TGRPAATLEM FPSWPMRFHQ  120
TPRVGSSKSA GGESTDSGSQ VNTTTLTSKG DQTQLEPESP ISKISSSSNH HHHPALDQNH  180
LQFQQQQQLQ QDMAISDTSR ATTVAATEAS KGQSAPKPTH EKRKGAGSTS ETKQLDAKTL  240
RRLAQNREAA RKSRLRKKAY VQQLESSRIK LTQLEQDLQR ARAQGLLMGG CGSGFGNISS  300
GAAIFDMEYA RWLEDDHRHM SELRTGLQAH LSDNDLRVVV DGYISHYDEI FQLKGVAAKS  360
DVFHLITGMW TSQAERCFLW MGGFRPSELI KMLIQQLDPL TEQQVMGIYS LQHSSQQAEE  420
ALTQGLDQLH QSLIDTIAGG PVIDGMQQMA VALGKLTNLE GFVRQADNLR QQTLHQLRRI  480
LTVRQAARCF LVIGEYYGRL RALSSLWASR PRESMMSDDN SCQTTTDLQM VQPSQNHFPS  540
F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.3	0.0	bZIP family protein