PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro03_G20675 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | bHLH | ||||||||
Protein Properties | Length: 254aa MW: 28824 Da PI: 8.4782 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 14.3 | 7.4e-05 | 50 | 70 | 10 | 30 |
HHHHHHHHHHHHHHHCTSCCC CS HLH 10 rrRRdriNsafeeLrellPka 30 +rRR+++ + f++Lre +P++ Ro03_G20675 50 KRRRSNLEEYFARLRENVPPP 70 9******************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
NAKPLSDQCQ NPVRQAKRSF WEALGQDHKP ERPAKRFLQP AKKHRDKPTK RRRSNLEEYF 60 ARLRENVPPP LLMPPPVPLR ELIEKFPLSR PFGFDYVVEE VAAVVQFRYG SEAEQPPQIP 120 IEVVVHDDSP KNTEGSKFMS NIIKRLYSGV KLNCDEARNT KFRKTGDYEC PMCLKNDGHS 180 PVSCPYSFCV PKVDGKPVPV GPGCDIVCRA CGGQNCFDDH GWDSDDCPNK LSGMEAYEAF 240 KLNTIPIGPP VRRW |