PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro03_G14122 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | MYB | ||||||||
Protein Properties | Length: 324aa MW: 35902.8 Da PI: 4.7654 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.5 | 8.6e-15 | 28 | 75 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++ G g+W+ +ar g+ R++k+c++rw +yl Ro03_G14122 28 KGLWSPEEDEKLMRYMLNNGQGCWSDVARNAGLERCGKSCRLRWINYL 75 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.9 | 1.5e-15 | 81 | 124 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E++l+++ + +lG++ W+ Ia++++ gRt++++k++w++ Ro03_G14122 81 RGAFSPQEEDLIIHFHSLLGNR-WSQIAARLP-GRTDNEIKNFWNS 124 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence |
MRKPEPSSAT STGKNNKNNS MSNNKLRKGL WSPEEDEKLM RYMLNNGQGC WSDVARNAGL 60 ERCGKSCRLR WINYLRPDLK RGAFSPQEED LIIHFHSLLG NRWSQIAARL PGRTDNEIKN 120 FWNSTIKKRI KLMSSSSSSS IASPNASDSS SDQPNNKDFF TAGGGGGGGG GGGRGFMNII 180 PPSMMPIYAD SSLINHMFEP FPMIEQGGYY NNGTPCTTQV GSVGGENCGF GETTIGVFGV 240 EEEIFVPPLE SVSTTDQDQN LKTETIFYDH NNYYSNSNNI KGENMMGVGN YFEDDQDQGL 300 TMGEWDLEDL MKDVSSFPFL DYQS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G08500.1 | 2e-72 | MYB family protein |