PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro03_G13483 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | G2-like | ||||||||
Protein Properties | Length: 621aa MW: 70051.6 Da PI: 9.9833 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 93.3 | 2e-29 | 102 | 155 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH++Fv+av+ LGG++ AtPk+il++m+ kg+t+ h+kSHLQ+YR+ Ro03_G13483 102 PRLRWTPDLHRSFVHAVDLLGGEDIATPKHILQTMNAKGITICHIKSHLQMYRS 155 8****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 43.4 | 8.1e-14 | 103 | 154 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v+av +lGg+ t+k I +tm+ kg t ++ks++q+y+ Ro03_G13483 103 RLRWTPDLHRSFVHAVDLLGGEdiaTPKHILQTMNaKGITICHIKSHLQMYR 154 89************************************************97 PP | |||||||
3 | G2-like | 90.5 | 1.5e-28 | 345 | 394 | 2 | 51 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 prlrW+ +LH++Fv+ave+LGG+++AtPk il++m+vkgLt++h+kSHLQ Ro03_G13483 345 PRLRWSADLHRCFVHAVERLGGEDRATPKLILQIMNVKGLTISHIKSHLQ 394 8************************************************* PP | |||||||
4 | Myb_DNA-binding | 44.6 | 3.4e-14 | 346 | 394 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 r+rW+++++ +v+av++lGg+ t+k+I + m+ kg+t ++ks++q Ro03_G13483 346 RLRWSADLHRCFVHAVERLGGEdraTPKLILQIMNvKGLTISHIKSHLQ 394 89**********************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 621 aa Download sequence |
MAMKRVELGE GNSLRGTPFS SLDNGEQKQL QFTPQFSSYG NHDMSIAASH EQMRVPHVNF 60 PAERMILPRP THRVNFRAER IILPRPTQLA AMVRPYVRSR APRLRWTPDL HRSFVHAVDL 120 LGGEDIATPK HILQTMNAKG ITICHIKSHL QMYRSMKHEE RVQDAAAREK MNVKGKASSS 180 NDSYLRYSII NNTTRLREDE IPIKPKSYII FTDILGGYST DNTRESNDQG VEVRGVRLSG 240 TGSSNVNDVN LELTLGLQCP FEAGKRLSLK DTMSNRAMKR IDRLSSSSSS LGNGEVYSPH 300 FGDHNMKIAA QRMTVYHTNL PADQISLLKS SSSTVVRPYV RSKVPRLRWS ADLHRCFVHA 360 VERLGGEDRA TPKLILQIMN VKGLTISHIK SHLQVSCSKF FFELAMSLSG RWEVQLGLLK 420 LALLSHVEVC HEQMYRSMKH EKRIQEAAMA AKKNDKAKAL DSSISYLLYP MKSTTTQPNY 480 CQRNDWRMRN MYNSAPYQSN RSSYYIEGID LKNTSTLAKW NNENSKQNSY IIFTDLVKRG 540 TDNALENNDQ GKVLSLVNAG CKSNHPKRED LSGDSESGGD IDATVSLSLK SSSKAYYSQR 600 FRLSDAGISD VNDVSLELTL T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02060.1 | 2e-28 | G2-like family protein |