PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro03_G06314
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family bZIP
Protein Properties Length: 343aa    MW: 38265.3 Da    PI: 9.6641
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro03_G06314genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.71.6e-10154204656
                  HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                  + +r  +NR++A++sR++K++++ e e+k+k+L+a+   L  ++e  k++ 
  Ro03_G06314 154 KLKRILSNRVSAQKSRLKKLQYVIEMEKKAKALQAQIAVLSPQVEFFKNQN 204
                  679999*****************************9988888888777766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MEADKKLRNI SQLERVAPGA NRPFSMMAPS TLPLAPNLSQ VWKQPYLMNR FENGESSSGA  60
KAHFQPLLDP KTTNTNTNTN TTTTTTTTTP AVEAMKDNGK KSQEDSDSDD DHGDDGKIVT  120
VKTEKEEKDD TPIGAPLQIR VGRNVAPESL DPRKLKRILS NRVSAQKSRL KKLQYVIEME  180
KKAKALQAQI AVLSPQVEFF KNQNYFLQIE QSSLKQSISA YAVDKLHKDA LIEENKNEVQ  240
RLRRLQLKKL EQQQMQLQAS MFMNMEVSGS SMDQKMVSKP GFNQYELGKM VYSSGSKEES  300
GVKAAEEKTQ NQISEAEQKP ANVKPSSEVG GNKGVMLPLN ETT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.24e-24bZIP family protein