PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro02_G35659 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | WRKY | ||||||||
Protein Properties | Length: 631aa MW: 70605.6 Da PI: 6.0744 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 89.3 | 3.2e-28 | 555 | 615 | 1 | 58 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 ldDgy+WrKYGqKe+ g+++pr+YYrCt++ gC ++k+v+r +ed++++eitY+g+H++ Ro02_G35659 555 LDDGYSWRKYGQKEILGAKYPRGYYRCTHRntqGCLATKQVQRMDEDQTILEITYRGNHTC 615 59***************************98889*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 631 aa Download sequence |
MTSLALNFLG GAPFQLLYDS VKTAIGRTRK FRTHLINLKS TLDCLQIIQQ ISDNNVQLSL 60 PNDITQDVLV KMEDGAALID ELSSLSLCSI HVWGNCCNCI KPNYADQLDE LDRSLRRLLE 120 LLKLEQMRNV TLLMLKLDEV QRGQSDILKT LQENRGARAE QQVIQRIQEN GQHREGNGGG 180 GGGGGAAPAL GAVFGTLVDV VIQVKVKNLI FKRLLGELKS SLDYLKPLIE EIAKRNKVFH 240 LPKHEVENFI SEMEKGIVLV HKCSKVRKWF NYKKYECTSK LLRLDEYLQR LFIELKGQLE 300 MNVKEVIDSQ TSIEAVIKQI EEGVVVQNGE IESASWSSVP KLLHSQKTKG IRYVIKETLV 360 DSVGIIEEGV KPSEGSDVIQ NQIQSEPLLP TVGLDALNVQ EARDVIKETL ASIRNIEVGV 420 MGTEGRELVV DSTRNVQVTT DVKETLVDST GIIEEGFKPS EGKELAKQLI LNPSATSASP 480 DTREFSMQEK LSSYEEILIG CNAPQTVGGI AHVPDSWGDN DQQDLQDVSK KRKTLAKWTE 540 QVRVSSENGI ERSPLDDGYS WRKYGQKEIL GAKYPRGYYR CTHRNTQGCL ATKQVQRMDE 600 DQTILEITYR GNHTCCQVSK LVPPPSPQQQ E |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23810.1 | 3e-41 | WRKY family protein |