PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro02_G26944
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family Dof
Protein Properties Length: 305aa    MW: 34081.1 Da    PI: 4.8909
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro02_G26944genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof119.21.5e-373488660
       zf-Dof  6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
                  +cprC s+ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rkn++
  Ro02_G26944 34 PNCPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRR 88
                 58***************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MFTAPAVQQM LHCPSGPLIM NQKPSWKPHV EIAPNCPRCA SSNTKFCYYN NYSLSQPRYF  60
CKGCRRYWTK GGSLRNVPVG GGCRKNRRGR SVRLSQADRV SLSYYHRNSS SSSGDDPSSE  120
DYSKEGGANG SDIDLAVVFA NFLNQNSGND HDHDPNLVGS ESMRDDDHER NALSDHSQIS  180
SNPTEDLLEP VELLEGLVLP DHQVYQQLQE EDNIQNFMAN QHHHDMSVHE FALQGLQGVE  240
DVFWTNATTT SLTNTTTNSF TWQELDNSFP SDDDDHMKIS TTATTLCSDN WSSFDFSGFG  300
VFSGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.12e-39Dof family protein