PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro02_G25268
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family bZIP
Protein Properties Length: 382aa    MW: 41922 Da    PI: 9.7961
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro02_G25268genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.15.2e-15243298358
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                  + +r+rr++kNRe+A rsR+RK+a++ eLe  +  Le+eN++L ke  + + +v +
  Ro02_G25268 243 AQQRQRRMIKNRESAARSRERKQAYQVELEALAVRLEEENEQLLKEKMRSSSQVTY 298
                  679******************************************98888887765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    
MASSKLMSSS SKSRNSDLSR RPSSNSTKPK PSPSSSSAAP QTLNNNNNNN SSSSSYINTG  60
NPTPPQLGSM TVDGLFRDLY NNSLTPADAS LLDAQITLID TAGLEINSAS VSSSAPPPPP  120
RPKTVDEVWQ EIVSGESRKE CKEEVPDEMM TLEDFLARAG AVEENDIKDL HLVPQPETET  180
ERLSGGAAFA FDQITLSPFP SIDKVEGSIA GFGNGGAELA ASGGGRGRGK RARAVLEPLD  240
KAAQQRQRRM IKNRESAARS RERKQAYQVE LEALAVRLEE ENEQLLKEKM RSSSQVTYTQ  300
SLTDLGHVVG GESILRNLGL VLRVKTHSLV LLSATKARWE RGSRDFAERT EERRKQLMEN  360
VIPVVEKRRP SRVLRRVRSL QW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.19e-35bZIP family protein