PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro02_G02440 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | Dof | ||||||||
Protein Properties | Length: 222aa MW: 23615.1 Da PI: 7.1466 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 118.1 | 3.3e-37 | 10 | 68 | 4 | 62 |
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 + l+cprC+st tkfCyynny+l+qPr+fC++CrryWt+GGalr+vPvGgg+rknk+++ Ro02_G02440 10 DPLPCPRCNSTVTKFCYYNNYNLAQPRHFCRSCRRYWTQGGALRDVPVGGGTRKNKAKR 68 5689***************************************************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MGYPPPPSAD PLPCPRCNST VTKFCYYNNY NLAQPRHFCR SCRRYWTQGG ALRDVPVGGG 60 TRKNKAKRSR NQAAAGSSSS TSPSSSSLTH DTKPILDKSD EHLLNLTDHI AAATSGGFSS 120 LMMMNPQEQP GFLSLGGYGY GSGLAHGFQQ GFGYAAFPPE GASVNGVPAY SSVFNTWQMP 180 GADHEGGLVD DNGSHCFDWP ELDISNSMPA VNGKEANSSL AV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66940.1 | 2e-29 | Dof family protein |