PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ro02_G00753

Organism

Rubus occidentalis

Taxonomic ID

75079

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus

Family

bZIP

Protein Properties

Length: 327aa MW: 35224.8 Da PI: 6.0435

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ro02_G00753	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	53.2	6.2e-17	159	211	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 kr rr+ +NRe+ArrsR+RK++ ++eLe v+ L +eN+aL +l ++++ Ro02_G00753 159 KRIRRMVSNRESARRSRKRKQQHLQELEGQVDILRGENSALYRQLTDASQHYR 211 9****************************************988877776665 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MERNSAAVHS QTTPSLFGSS FAYHLKPSPS QLEFQECLEK IAADGEFRTD GFFGDVCSGD 60 LSFAFKNRDI RHGFSSSGVL TETLLSPQNL TPKNSSISAP MDSQSSICVG TPTSAANPIG 120 RDSQARGATS GSSGEQSDED DFEIEAGPCG DSTDPLDNKR IRRMVSNRES ARRSRKRKQQ 180 HLQELEGQVD ILRGENSALY RQLTDASQHY RDADTNNRVL KSDVEALRAK VKLAEDMVAR 240 GSLTSSLNQV LLQGHLSTPQ PINPHTLRSI AHVSPTITIH GEDASYAGIA FSGQNSGIGL 300 GNAAGTTNNN MSSRIMSDAA SCVSDMW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	172	178	RRSRKRK
2	172	179	RRSRKRKQ
3	174	179	SRKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	2e-64	bZIP family protein