PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ro02_G00599

Organism

Rubus occidentalis

Taxonomic ID

75079

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus

Family

bZIP

Protein Properties

Length: 434aa MW: 46786.5 Da PI: 10.2303

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ro02_G00599	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	51.4	2.3e-16	353	408	5	60
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++Lkk+ +e+ ++ ++ + Ro02_G00599 353 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQDLKKKQDEMMELQKNQD 408 79******************************************999998876655 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MGTNMNFKGF VTDFQGDGGG RPPGNNNNAL ARQSSIYSLT FDELQNTMGG PGKDFGSMNM 60 DELLKSIWTA EETQGMVPTG VVTGQDQGLP LQRQGSLTLP RTLSQKTVDE VWRNLSKDGN 120 GAAGGSNVPQ RQQTLGEMTL EEFLVRAGVV REDAPIAAKA TNSNGGAFFG ELARFGNTGA 180 TLGFGFQQPD RSVGVMGNRI SENGNQIPNQ ASNLPLNANG VRSNQQQQLP QQQQQQIFPK 240 QQPVTYSTSQ LALMPHSQLG SPGMRGGIMG IGEQGLSNGL VQSPVLQGGG MAMVGLGAGN 300 NRVVAVSPVN QLSSDGIGKS NGTDTSSVSP IPYVLNGGFR GRKGGPVEKV VERRQRRMIK 360 NRESAARSRA RKQAYTMELE AEVAKLKEEN QDLKKKQDEM MELQKNQDME IQNLQRGGKR 420 RCLRRTQTGP CYNA

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MGTNMNFKGF VTDFQGDGGG RPPGNNNNAL ARQSSIYSLT FDELQNTMGG PGKDFGSMNM  60
DELLKSIWTA EETQGMVPTG VVTGQDQGLP LQRQGSLTLP RTLSQKTVDE VWRNLSKDGN  120
GAAGGSNVPQ RQQTLGEMTL EEFLVRAGVV REDAPIAAKA TNSNGGAFFG ELARFGNTGA  180
TLGFGFQQPD RSVGVMGNRI SENGNQIPNQ ASNLPLNANG VRSNQQQQLP QQQQQQIFPK  240
QQPVTYSTSQ LALMPHSQLG SPGMRGGIMG IGEQGLSNGL VQSPVLQGGG MAMVGLGAGN  300
NRVVAVSPVN QLSSDGIGKS NGTDTSSVSP IPYVLNGGFR GRKGGPVEKV VERRQRRMIK  360
NRESAARSRA RKQAYTMELE AEVAKLKEEN QDLKKKQDEM MELQKNQDME IQNLQRGGKR  420
RCLRRTQTGP CYNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	1e-119	bZIP family protein