PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro01_G27445 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | FAR1 | ||||||||
Protein Properties | Length: 229aa MW: 25845.1 Da PI: 6.9811 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 46.1 | 1.6e-14 | 74 | 188 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..........................tekerrtraetrtgCkaklkvkkek. 72 Y Y++ v Fs+r+ k + r+g +++r +vCsk+g + + kk + +++ + r+ C a ++v+ +k Ro01_G27445 74 LYTYYSHVVKFSTRRYKLDRD-RDGVVIWRGWVCSKHGLAPDIKKIyankggkhmgsepkiakkliesssrsMLHLEEQDTRGRVCCPAAFTVRYSKe 170 79***************9998.9999*************9998887999****************9876665444455888899***********999 PP FAR1 73 dgkwevtkleleHnHela 90 +g+++v+k+ +HnHela Ro01_G27445 171 KGVYYVSKFAAQHNHELA 188 ****************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MDTDECGLRF SNCAYYCSFS SDEDELEEYA SLGEATKSDV SGGYVHFNGK NIKKLDMKDL 60 ENVDFAIVDE AENLYTYYSH VVKFSTRRYK LDRDRDGVVI WRGWVCSKHG LAPDIKKIYA 120 NKGGKHMGSE PKIAKKLIES SSRSMLHLEE QDTRGRVCCP AAFTVRYSKE KGVYYVSKFA 180 AQHNHELATP EEVQFLRSHR GGSGLYCCVQ WAGKQLVGEI VVHQAGEVG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-09 | FAR1 family protein |