PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro01_G26399 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | G2-like | ||||||||
Protein Properties | Length: 531aa MW: 60050.8 Da PI: 8.0039 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 87.9 | 9.3e-28 | 154 | 219 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGse...........kAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LHerF+eav+qLGG++ +AtPkt+++lm+++gLtl+h+kSHLQkYRl Ro01_G26399 154 KPRLKWTPDLHERFIEAVNQLGGADtddtnfmlsdpEATPKTVMKLMGIPGLTLYHLKSHLQKYRL 219 79*********************98444444444456****************************8 PP | |||||||
2 | Myb_DNA-binding | 63.5 | 4.1e-20 | 156 | 218 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..............-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..............tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT++++e++++av+qlGg t+kt+++ mg g+tl+++ks++qky+ Ro01_G26399 156 RLKWTPDLHERFIEAVNQLGGAdtddtnfmlsdpeaTPKTVMKLMGiPGLTLYHLKSHLQKYR 218 89******************99****************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 531 aa Download sequence |
NKDNIDLFPS RCDYWIGSIS FFPIKILFYA SQAFSIPPPI FFIKTCSAHP LVVRNIAKYK 60 EKRDSNLAYR KREQSSLKVV IIIIIIIVRH PADPDRMMYH HHHQHQHQHQ HQHQEKSIHS 120 SSSRMAIPPE RRHLFLQPET CPGDSGLVLS TDAKPRLKWT PDLHERFIEA VNQLGGADTD 180 DTNFMLSDPE ATPKTVMKLM GIPGLTLYHL KSHLQKYRLS KNLHGHANSG TNKIGTVAVA 240 VTGERIPEAN ATHMNNMSIG PQSNKGLHIN ETLQMQIEVQ RKLHEQLEVQ RHLQLRIEAQ 300 GKYLQSVLEK AQETLGRQNL GTVGLEAAKV QLSELVSKVS TQCLNSAFTE LKEVQGLCPQ 360 NQPTDCSMDS CLTSCEGSKK DQEIQNSSGM GIRAYNSRVL LESKEIAEET MPHQKDNNIF 420 VSTLSKNVEQ RMFPSETRSG DLSMSIGLQR EKWNGSNCNS EERFKGRNTD DSFLDHTNNR 480 ADSVKVDQTQ KVSQAYRSVP YFAAKLDLNS HEDTDASSSC KQFDLNGFSW S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04030.3 | 1e-137 | G2-like family protein |