PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro01_G10742
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family bZIP
Protein Properties Length: 361aa    MW: 40720.3 Da    PI: 6.5317
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro01_G10742genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.91.6e-1174112240
                  XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 
                  + +k++rr+++NReAAr+sR RKka++++Le+   +L +
  Ro01_G10742  74 PTDKVQRRLAQNREAARKSRMRKKAYVQQLETSRLKLVQ 112
                  579****************************86555554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MGLGGERDIA KRMSAYEPIH QMSMWGESFM SNGNLNASAS MIMDADTKLD NQSEDASQGI  60
LEPCSKYDQE ATKPTDKVQR RLAQNREAAR KSRMRKKAYV QQLETSRLKL VQLEQELDRA  120
RQQGLYIGSG LDANPLGFSG TMNSGVAAFE MEYGHWVEEQ NRQISELRTA LQAHISDIEL  180
RFLVDGGMSH YFELFTMKST AAKADVFYVM SGMWKTSAER IFSWIGGFRP SELLKVLVPQ  240
LYPLAEQQHV EVYSLRQSCQ QAEDALSQGM DKLQLTLAET VAAGQLGEGS YVPQMAIAME  300
KLEALVSFVN QADHLRRETL QQMSRILTIR QAARGLLALG EYFQRLRALS SLWTTRPREP  360
T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.20.0bZIP family protein