PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_ssc0000441.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

G2-like

Protein Properties

Length: 400aa MW: 44742 Da PI: 6.4206

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_ssc0000441.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.9	4.8e-33	255	310	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a++qLGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+ Rmu_ssc0000441.1_g000001.1 255 KQRRCWSPELHRRFVDALQQLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 310 79****************************************************97 PP
2	Myb_DNA-binding	46.8	7e-15	257	308	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++vda +qlGg t+k I + m+ g+t ++ks++qky+ Rmu_ssc0000441.1_g000001.1 257 RRCWSPELHRRFVDALQQLGGSqvaTPKQIRELMQvDGLTNDEVKSHLQKYR 308 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
VYLGYARDPK TEREIENKTN MELSLDSNMV FVPKTISEFL SQVSAVKDGA QRSLKREEYV 60 KRLEDEMRKI EVFKRELPLC MVILKDAIER LKEEVMQCGK VEDRAVIEEF IPLKKKDENE 120 GVVSEKENSD MKSWMSSAQL WSTNINVDYS KSGLKMRNED DDRSVPENPI EISNKRSRGG 180 AFVPFKGNYE SGFARTCVKE DKEVSQVPSL SLMTPTSELG GFNNANSKSS TRGGSGPSLA 240 KLQIEHQQQQ QCFRKQRRCW SPELHRRFVD ALQQLGGSQV ATPKQIRELM QVDGLTNDEV 300 KSHLQKYRLH VRKVPASSAG EASGLWMNQD HCGDNSKANT SQSGSPQGPL LGMEFAKGGQ 360 STTGGNSTET EEDDQNSDGH SWKGARHNSG GDVESCINPL

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

VYLGYARDPK TEREIENKTN MELSLDSNMV FVPKTISEFL SQVSAVKDGA QRSLKREEYV  60
KRLEDEMRKI EVFKRELPLC MVILKDAIER LKEEVMQCGK VEDRAVIEEF IPLKKKDENE  120
GVVSEKENSD MKSWMSSAQL WSTNINVDYS KSGLKMRNED DDRSVPENPI EISNKRSRGG  180
AFVPFKGNYE SGFARTCVKE DKEVSQVPSL SLMTPTSELG GFNNANSKSS TRGGSGPSLA  240
KLQIEHQQQQ QCFRKQRRCW SPELHRRFVD ALQQLGGSQV ATPKQIRELM QVDGLTNDEV  300
KSHLQKYRLH VRKVPASSAG EASGLWMNQD HCGDNSKANT SQSGSPQGPL LGMEFAKGGQ  360
STTGGNSTET EEDDQNSDGH SWKGARHNSG GDVESCINPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37180.1	4e-67	G2-like family protein