PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Rmu_ssc0000438.1_g000005.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
|
||||||||
Family | HB-other | ||||||||
Protein Properties | Length: 124aa MW: 13782.4 Da PI: 9.6579 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 23.4 | 1e-07 | 3 | 21 | 38 | 56 |
TS-HHHHHHHHHHHHHHHH CS Homeobox 38 gLterqVkvWFqNrRakek 56 +++ ++V++WFqN+Ra+ek Rmu_ssc0000438.1_g000005.1 3 QIENKNVFYWFQNQRAREK 21 5899**************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 124 aa Download sequence |
MEQIENKNVF YWFQNQRARE KLKKRNLTSD VQVPKQRSGL VGGSINLNFG STSSADVGGS 60 IMEQRGEDHQ EVKTVPLFPM HSEDIFGNMK TTSDRGGGHG GGSYISLELS LSCEGKAGKR 120 FWSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G11260.1 | 1e-08 | WOX family protein |