PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_ssc0000366.1_g000027.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WRKY | ||||||||
Protein Properties | Length: 316aa MW: 35212.6 Da PI: 7.4681 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 103.9 | 8.9e-33 | 166 | 222 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 +Dgy+WrKYGqK vk+s+fprsY+rCtsa+C+vkk+ver+ +dp +v++tYeg+H+h Rmu_ssc0000366.1_g000027.1 166 EDGYRWRKYGQKAVKNSPFPRSYFRCTSASCNVKKRVERCVNDPGIVVTTYEGQHTH 222 8******************************************************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence |
MEKKDHLIKM EGNTRSSSFS VTTADYSYPF PGMFDFSQGE QKDSLGFMEL LGIQDFCPAN 60 SLFDLPQITT PQVLPTTSID MAKEYSFNPS TPNSSSISSA SSEAVNEEPH TDKKAAADLQ 120 EEDDGHDQPE PKKGLKANQK RKKTTEKKLR EPRFAFMTKS EVDHLEDGYR WRKYGQKAVK 180 NSPFPRSYFR CTSASCNVKK RVERCVNDPG IVVTTYEGQH THLSPLMLPL PPPPPPTTAP 240 NSIIMPRTLF SQYQQQQGLR PFADNQGCNL GFSTPNGTNR SFLNERCFCS PAGGSALMTD 300 HGLLQDIVPS NMLKQG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47260.1 | 3e-41 | WRKY family protein |