PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_ssc0000264.1_g000034.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

ERF

Protein Properties

Length: 451aa MW: 51016.4 Da PI: 5.5598

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_ssc0000264.1_g000034.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	60.3	4.6e-19	203	253	2	56
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+WvAeIr p++ r+r +lg+f+tae+Aa a+++ + kl+ge Rmu_ssc0000264.1_g000034.1 203 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 253 59****9.******955...5************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
METSRDCDLD KGKERDFFLE SCQWKPVFDE ASMSHRPLKK IKSPEHSHQH QSSSAFPPEF 60 HIPSSPPRSS SDTSSITSCC PFSSRIVFPF AFDGSLPQQQ QPIQFPHQFQ TTGLQPIQFP 120 PTTNVVEQQQ QQQQNQQQMI SFTSQQQQMI SWRQQQQQQM LQYWSDALNL SPRGRMMMMN 180 RFGGANSSGG IRPAAMPVST SKLYRGVRQR HWGKWVAEIR LPRNRTRLWL GTFDTAEDAA 240 MAYDREAFKL RGENAKLNFP ELFLNKDKDN NNAAAVSTAP SSTETASVPT QQVSKPSRHR 300 GKPLLKDLDL QLQVPISDRE TIAPPPAPYS HPQEDDDTGE SDLANASQQS EVENHGEGGG 360 IISDAPTQEM AWGEMAEAWM NAIPQGWGPG SPVWDDLELD MTSNNLVLQS HDYHHFTANN 420 PNRHELPQQE DNSCSASSSY PMQPFFWKDQ D

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

METSRDCDLD KGKERDFFLE SCQWKPVFDE ASMSHRPLKK IKSPEHSHQH QSSSAFPPEF  60
HIPSSPPRSS SDTSSITSCC PFSSRIVFPF AFDGSLPQQQ QPIQFPHQFQ TTGLQPIQFP  120
PTTNVVEQQQ QQQQNQQQMI SFTSQQQQMI SWRQQQQQQM LQYWSDALNL SPRGRMMMMN  180
RFGGANSSGG IRPAAMPVST SKLYRGVRQR HWGKWVAEIR LPRNRTRLWL GTFDTAEDAA  240
MAYDREAFKL RGENAKLNFP ELFLNKDKDN NNAAAVSTAP SSTETASVPT QQVSKPSRHR  300
GKPLLKDLDL QLQVPISDRE TIAPPPAPYS HPQEDDDTGE SDLANASQQS EVENHGEGGG  360
IISDAPTQEM AWGEMAEAWM NAIPQGWGPG SPVWDDLELD MTSNNLVLQS HDYHHFTANN  420
PNRHELPQQE DNSCSASSSY PMQPFFWKDQ D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20880.1	2e-46	ERF family protein