PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_ssc0000250.1_g000026.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Dof

Protein Properties

Length: 367aa MW: 39093.8 Da PI: 8.6812

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_ssc0000250.1_g000026.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120	8.4e-38	76	136	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+alkcprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GGalr vPvGgg+r+nk+s+ Rmu_ssc0000250.1_g000026.1 76 PETALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRSK 136 67899*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MVFSSIPGYL DPPNWQQQQS THHHQQQGGG TDQNPHLLPP PPPPSGGPGD AGNGGAGTIR 60 PGSMSDLARQ AKLPQPETAL KCPRCESTNT KFCYFNNYSL TQPRHFCKTC RRYWTRGGAL 120 RSVPVGGGCR RNKRSKRSKS PASASAADHH HQRQGGAGSS SSTVSNSNSC STSENILGHL 180 APPPHQFPFL PSLHHLSDYS SGGLSFGGIQ QPSGVEFHSQ NIGASGNSGG VGSILSTGMA 240 EHWRSSLQHH QVQQGQQFPF LANLEPPSSH GLYQFDDNQN NAHDTASYGK GAGQLLSKPL 300 VDSSIGATQV ANVKMEESQA LNMSRNFLGS LGNDHHQQYW GSTTAAGGIN NAWTDLSGFT 360 SSTSHLL

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MVFSSIPGYL DPPNWQQQQS THHHQQQGGG TDQNPHLLPP PPPPSGGPGD AGNGGAGTIR  60
PGSMSDLARQ AKLPQPETAL KCPRCESTNT KFCYFNNYSL TQPRHFCKTC RRYWTRGGAL  120
RSVPVGGGCR RNKRSKRSKS PASASAADHH HQRQGGAGSS SSTVSNSNSC STSENILGHL  180
APPPHQFPFL PSLHHLSDYS SGGLSFGGIQ QPSGVEFHSQ NIGASGNSGG VGSILSTGMA  240
EHWRSSLQHH QVQQGQQFPF LANLEPPSSH GLYQFDDNQN NAHDTASYGK GAGQLLSKPL  300
VDSSIGATQV ANVKMEESQA LNMSRNFLGS LGNDHHQQYW GSTTAAGGIN NAWTDLSGFT  360
SSTSHLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.2	4e-48	Dof family protein