PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_ssc0000243.1_g000024.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

G2-like

Protein Properties

Length: 304aa MW: 33329.3 Da PI: 6.8573

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_ssc0000243.1_g000024.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108	5.1e-34	18	72	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl Rmu_ssc0000243.1_g000024.1 18 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 72 79****************************************************8 PP
2	Myb_DNA-binding	63.6	3.8e-20	20	71	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+k + r mg +g+t +++ks++qky+ Rmu_ssc0000243.1_g000024.1 20 RLRWTHELHERFVDAVAQLGGPdraTPKGVLRVMGvQGLTIYHVKSHLQKYR 71 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MDNVNGAKSP SNSNLASKQR LRWTHELHER FVDAVAQLGG PDRATPKGVL RVMGVQGLTI 60 YHVKSHLQKY RLAKYVPDSS SDGGKADKKE PGDMLSNVDG SSGMQITEAL KLQMEVQKRL 120 HEQLEVQRQL QLRIEAQGKY LKKIIEEQQR LGGVLSEAPA PGNSTRASDD NCPESDKVDP 180 ATPAPTSECP IQDKAIKERA PAKSLSVDES CSSRHDEPST PDSGCHVISP AESPKAERST 240 KKQRFSMGEA FSNPEVVLTH QILESSLNSY QQAHTIFMPR EHSNPTSGIS VRNVDLEQVA 300 GSDM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	1e-115	G2-like family protein